Logo
Version dev (3c65ceb13)

Get started

  • Overview
  • Installation
  • Your first script

Language

  • Scripts
  • Processes
  • Channels
  • Operators
  • Workflows
  • Modules
  • Configuration
  • Migrating from DSL 1

Execution

  • Command line interface (CLI)
  • Executors
  • Caching and resuming
  • Reports
  • Metrics
  • Pipeline sharing
  • Workflow introspection
  • Mail & Notifications
  • Plugins
  • Secrets

Software dependencies

  • Containers
  • Conda environments
  • Spack environments
  • Wave containers

Compute & storage platforms

  • AWS Cloud
  • AWS S3 storage
  • Azure Cloud
  • Fusion file system
  • Google Cloud
  • Kubernetes

Additional integrations

  • Flux Framework

Contributing

  • Overview
  • Workflow Diagram
  • Packages
    • nextflow
    • nextflow.ast
    • nextflow.cache
    • nextflow.cli
    • nextflow.cloud.aws
    • nextflow.cloud.aws.nio
    • nextflow.cloud.azure
    • nextflow.cloud.google
    • nextflow.config
    • nextflow.container
    • nextflow.dag
    • nextflow.executor
    • nextflow.extension
    • nextflow.k8s
    • nextflow.plugin
    • nextflow.processor
    • nextflow.scm
    • nextflow.script
    • nextflow.secret
    • nextflow.trace
  • Core plugins
Nextflow is developed by:
Seqera Labs
Nextflow
  • Packages
  • Edit on GitHub

Packages

The following subpages correspond to packages in the Nextflow source code:

  • nextflow
  • nextflow.ast
  • nextflow.cache
  • nextflow.cli
  • nextflow.cloud.aws
  • nextflow.cloud.aws.nio
  • nextflow.cloud.azure
  • nextflow.cloud.google
  • nextflow.config
  • nextflow.container
  • nextflow.dag
  • nextflow.executor
  • nextflow.extension
  • nextflow.k8s
  • nextflow.plugin
  • nextflow.processor
  • nextflow.scm
  • nextflow.script
  • nextflow.secret
  • nextflow.trace
Previous Next

© Copyright 2024, Seqera Labs, S.L.

Built with Sphinx using a theme provided by Read the Docs.